Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 YBX1P5-201ENST00000509441 847 ntBASIC16.78■□□□□ 0.28
CCDC97Q96F63 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC97Q96F63 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC97Q96F63 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC97Q96F63 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC97Q96F63 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 SLC22A20-204ENST00000530038 1673 ntBASIC16.78■□□□□ 0.28
CCDC97Q96F63 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC97Q96F63 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC97Q96F63 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC97Q96F63 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC97Q96F63 LINC00554-201ENST00000564841 3011 ntBASIC16.78■□□□□ 0.28
CCDC97Q96F63 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC97Q96F63 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC97Q96F63 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC97Q96F63 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 CRYGEP-201ENST00000412192 528 ntBASIC16.77■□□□□ 0.28
CCDC97Q96F63 HTR5BP-201ENST00000430851 1154 ntBASIC16.77■□□□□ 0.28
CCDC97Q96F63 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 CYMP-203ENST00000474680 1263 ntBASIC16.77■□□□□ 0.28
CCDC97Q96F63 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC97Q96F63 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC97Q96F63 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC97Q96F63 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC97Q96F63 AL603756.1-201ENST00000606511 2163 ntBASIC16.77■□□□□ 0.27
CCDC97Q96F63 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC97Q96F63 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC97Q96F63 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC97Q96F63 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC97Q96F63 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC97Q96F63 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC97Q96F63 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC97Q96F63 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC97Q96F63 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC97Q96F63 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC97Q96F63 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC97Q96F63 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
CCDC97Q96F63 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCDC97Q96F63 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCDC97Q96F63 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCDC97Q96F63 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC97Q96F63 MRPL20P1-201ENST00000400819 433 ntBASIC16.76■□□□□ 0.27
CCDC97Q96F63 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC97Q96F63 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC97Q96F63 KRT18P2-201ENST00000447938 1258 ntBASIC16.76■□□□□ 0.27
CCDC97Q96F63 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC97Q96F63 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC97Q96F63 RFPL4AP1-201ENST00000530883 850 ntBASIC16.76■□□□□ 0.27
CCDC97Q96F63 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC97Q96F63 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC97Q96F63 ACTL9-202ENST00000612068 1252 ntBASIC16.76■□□□□ 0.27
CCDC97Q96F63 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC97Q96F63 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms