Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
RFT1Q96AA3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.56□□□□□ -0.08
RFT1Q96AA3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RFT1Q96AA3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFT1Q96AA3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFT1Q96AA3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFT1Q96AA3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFT1Q96AA3 AC002310.6-201ENST00000624451 1377 ntBASIC14.56□□□□□ -0.08
RFT1Q96AA3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFT1Q96AA3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFT1Q96AA3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFT1Q96AA3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFT1Q96AA3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFT1Q96AA3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RFT1Q96AA3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 PPT1-215ENST00000641471 2368 ntBASIC14.55□□□□□ -0.08
RFT1Q96AA3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 GGT4P-201ENST00000623672 1708 ntBASIC14.55□□□□□ -0.08
RFT1Q96AA3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 AC023157.3-201ENST00000619086 2088 ntBASIC14.55□□□□□ -0.08
RFT1Q96AA3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 AP001269.4-201ENST00000609611 512 ntBASIC14.55□□□□□ -0.08
RFT1Q96AA3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.55□□□□□ -0.08
RFT1Q96AA3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 AC006449.6-201ENST00000612330 2296 ntBASIC14.55□□□□□ -0.08
RFT1Q96AA3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 SIGLEC16-201ENST00000599858 1437 ntBASIC14.55□□□□□ -0.08
RFT1Q96AA3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.55□□□□□ -0.08
RFT1Q96AA3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFT1Q96AA3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.54□□□□□ -0.08
RFT1Q96AA3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 ARMC10P1-201ENST00000313754 855 ntBASIC14.54□□□□□ -0.08
RFT1Q96AA3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 ATP5G2P1-201ENST00000433580 426 ntBASIC14.54□□□□□ -0.08
RFT1Q96AA3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 AC132008.2-207ENST00000454517 770 ntBASIC14.54□□□□□ -0.08
RFT1Q96AA3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 DUX4L17-201ENST00000557360 1267 ntBASIC14.54□□□□□ -0.08
RFT1Q96AA3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 AC243591.1-201ENST00000452967 1364 ntBASIC14.54□□□□□ -0.08
RFT1Q96AA3 AL021920.2-201ENST00000624828 1351 ntBASIC14.54□□□□□ -0.08
RFT1Q96AA3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFT1Q96AA3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.54□□□□□ -0.08
RFT1Q96AA3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms