Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 LAGE3P1-201ENST00000425356 484 ntBASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 SIGLEC30P-201ENST00000455569 941 ntBASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 AC008735.5-201ENST00000623544 497 ntBASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB40AQ8WXH6 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 AC073347.1-201ENST00000421633 2643 ntBASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 AC105339.3-201ENST00000560043 636 ntBASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 AC004817.3-201ENST00000602957 2129 ntBASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB40AQ8WXH6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB40AQ8WXH6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms