Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
BEST2Q8NFU1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 BASP1P1-201ENST00000430708 665 ntBASIC17.52■□□□□ 0.4
BEST2Q8NFU1 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
BEST2Q8NFU1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
BEST2Q8NFU1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
BEST2Q8NFU1 REXO1L8P-201ENST00000604378 1897 ntBASIC17.52■□□□□ 0.39
BEST2Q8NFU1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BEST2Q8NFU1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
BEST2Q8NFU1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BEST2Q8NFU1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BEST2Q8NFU1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
BEST2Q8NFU1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BEST2Q8NFU1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
BEST2Q8NFU1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 BANF1P1-201ENST00000553684 263 ntBASIC17.51■□□□□ 0.39
BEST2Q8NFU1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 AL589739.1-201ENST00000607720 493 ntBASIC17.51■□□□□ 0.39
BEST2Q8NFU1 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 CETN4P-206ENST00000642099 2168 ntBASIC17.51■□□□□ 0.39
BEST2Q8NFU1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BEST2Q8NFU1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
BEST2Q8NFU1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms