Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 AL035456.1-201ENST00000456064 1369 ntBASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 CROCCP2-202ENST00000412962 2773 ntBASIC14.81□□□□□ -0.04
RP1L1Q8IWN7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 FAM86MP-201ENST00000340703 885 ntBASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 RPL37AP1-201ENST00000412502 279 ntBASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 MEP1AP4-201ENST00000423244 1087 ntBASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 AC011495.1-201ENST00000498085 584 ntBASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.8□□□□□ -0.04
RP1L1Q8IWN7 AL133338.1-201ENST00000565695 1517 ntBASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RP1L1Q8IWN7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms