Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.99□□□□□ -0.01
SMARCD3Q6STE5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SMARCD3Q6STE5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SMARCD3Q6STE5 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SMARCD3Q6STE5 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SMARCD3Q6STE5 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SMARCD3Q6STE5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SMARCD3Q6STE5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 MIR1224-201ENST00000408193 85 ntBASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 KRT18P27-201ENST00000427733 1299 ntBASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 AF238378.1-201ENST00000526806 358 ntBASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 OR7E14P-202ENST00000530490 1290 ntBASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 DBET-201ENST00000630918 3363 ntBASIC14.98□□□□□ -0.01
SMARCD3Q6STE5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 AL365209.1-201ENST00000624418 6473 ntBASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 AC073621.1-201ENST00000392730 636 ntBASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.97□□□□□ -0.01
SMARCD3Q6STE5 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
SMARCD3Q6STE5 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SMARCD3Q6STE5 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.96□□□□□ -0.01
SMARCD3Q6STE5 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.96□□□□□ -0.01
SMARCD3Q6STE5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SMARCD3Q6STE5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms