Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 MIR4497-201ENST00000583208 89 ntBASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 AP000525.1-201ENST00000608286 694 ntBASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.73□□□□□ -0.37
KCNIP4Q6PIL6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 AC136621.1-201ENST00000624017 2304 ntBASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 MIR193BHG-211ENST00000641433 5365 ntBASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 AL031595.1-201ENST00000623969 4709 ntBASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 AC112698.1-201ENST00000510299 916 ntBASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 FITM1-202ENST00000559294 800 ntBASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 AL353719.1-201ENST00000566847 864 ntBASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 CR769767.2-201ENST00000622735 460 ntBASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 AC020658.6-201ENST00000623564 1870 ntBASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 AC007191.1-201ENST00000623179 2995 ntBASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP4Q6PIL6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms