Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 MIR4751-201ENST00000578027 74 ntBASIC16.75■□□□□ 0.27
CASC4Q6P4E1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CASC4Q6P4E1 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.74■□□□□ 0.27
CASC4Q6P4E1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 AC117500.6-201ENST00000624871 588 ntBASIC16.74■□□□□ 0.27
CASC4Q6P4E1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
CASC4Q6P4E1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 AC004870.1-201ENST00000315132 882 ntBASIC16.73■□□□□ 0.27
CASC4Q6P4E1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 AC079781.3-201ENST00000449110 356 ntBASIC16.73■□□□□ 0.27
CASC4Q6P4E1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 OR7E47P-204ENST00000575924 449 ntBASIC16.73■□□□□ 0.27
CASC4Q6P4E1 RN7SL510P-201ENST00000581311 263 ntBASIC16.73■□□□□ 0.27
CASC4Q6P4E1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 AC010654.1-201ENST00000615722 808 ntBASIC16.73■□□□□ 0.27
CASC4Q6P4E1 FAM215A-202ENST00000632077 792 ntBASIC16.73■□□□□ 0.27
CASC4Q6P4E1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.73■□□□□ 0.27
CASC4Q6P4E1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CASC4Q6P4E1 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms