Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 IGHV3-62-201ENST00000520057 340 ntBASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 AC022145.2-201ENST00000598203 171 ntBASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LDLRAP1Q5SW96 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 SPCS2P4-201ENST00000436160 681 ntBASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 AL592309.1-201ENST00000443127 649 ntBASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 AC105233.2-201ENST00000523697 349 ntBASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 AF228730.5-201ENST00000530288 346 ntBASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 AC027307.2-201ENST00000591252 911 ntBASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 AC004835.2-201ENST00000603762 682 ntBASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 AL691403.2-201ENST00000618460 490 ntBASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 AC139530.3-201ENST00000620344 690 ntBASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 AC073439.1-201ENST00000624121 1774 ntBASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LDLRAP1Q5SW96 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 SNHG9-202ENST00000564014 471 ntBASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 AC073389.1-201ENST00000595595 795 ntBASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.3■□□□□ 0.2
LDLRAP1Q5SW96 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms