Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 AC079781.5-202ENST00000641784 3743 ntBASIC17.38■□□□□ 0.37
ERCC6LQ2NKX8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC6LQ2NKX8 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ERCC6LQ2NKX8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC6LQ2NKX8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC6LQ2NKX8 GPAA1P2-202ENST00000606848 1787 ntBASIC17.38■□□□□ 0.37
ERCC6LQ2NKX8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ERCC6LQ2NKX8 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.38■□□□□ 0.37
ERCC6LQ2NKX8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ERCC6LQ2NKX8 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 AC117489.1-201ENST00000625169 3217 ntBASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 AL390755.1-201ENST00000623716 2027 ntBASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 AC067930.6-201ENST00000623257 4947 ntBASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 AC087499.1-201ENST00000418141 1075 ntBASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 ACTG1P4-201ENST00000425123 1122 ntBASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 AC005332.3-201ENST00000589904 676 ntBASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 AC010654.1-201ENST00000615722 808 ntBASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ERCC6LQ2NKX8 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 MIR662-201ENST00000384847 95 ntBASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ERCC6LQ2NKX8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ERCC6LQ2NKX8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC6LQ2NKX8 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC6LQ2NKX8 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
ERCC6LQ2NKX8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ERCC6LQ2NKX8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ERCC6LQ2NKX8 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms