Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTC1Q2NKJ3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 AC007431.3-201ENST00000623221 587 ntBASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTC1Q2NKJ3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 AC114501.2-201ENST00000439631 535 ntBASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 AC098859.1-201ENST00000502915 1238 ntBASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 AL512361.1-201ENST00000554200 418 ntBASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CTC1Q2NKJ3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms