Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.23□□□□□ -0.29
CX3CL1P78423 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CX3CL1P78423 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.23□□□□□ -0.29
CX3CL1P78423 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.23□□□□□ -0.29
CX3CL1P78423 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.23□□□□□ -0.29
CX3CL1P78423 AC104640.1-201ENST00000562617 2109 ntBASIC13.23□□□□□ -0.29
CX3CL1P78423 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CX3CL1P78423 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CX3CL1P78423 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.23□□□□□ -0.29
CX3CL1P78423 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.23□□□□□ -0.29
CX3CL1P78423 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.23□□□□□ -0.29
CX3CL1P78423 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CL1P78423 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.23□□□□□ -0.29
CX3CL1P78423 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CL1P78423 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CX3CL1P78423 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CL1P78423 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CL1P78423 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CX3CL1P78423 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CL1P78423 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
CX3CL1P78423 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CX3CL1P78423 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CL1P78423 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.23□□□□□ -0.29
CX3CL1P78423 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CL1P78423 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.23□□□□□ -0.29
CX3CL1P78423 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CL1P78423 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CL1P78423 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CX3CL1P78423 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.22□□□□□ -0.29
CX3CL1P78423 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.22□□□□□ -0.29
CX3CL1P78423 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CX3CL1P78423 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.22□□□□□ -0.29
CX3CL1P78423 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.22□□□□□ -0.29
CX3CL1P78423 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CX3CL1P78423 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CX3CL1P78423 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CX3CL1P78423 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CX3CL1P78423 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CX3CL1P78423 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CX3CL1P78423 RNU1-129P-201ENST00000384064 167 ntBASIC13.22□□□□□ -0.29
CX3CL1P78423 MIR940-201ENST00000401276 94 ntBASIC13.22□□□□□ -0.29
CX3CL1P78423 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
CX3CL1P78423 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CX3CL1P78423 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.22□□□□□ -0.29
CX3CL1P78423 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.22□□□□□ -0.29
CX3CL1P78423 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CX3CL1P78423 KRT19P2-202ENST00000557173 1012 ntBASIC13.22□□□□□ -0.29
CX3CL1P78423 U1.21-201ENST00000580816 167 ntBASIC13.22□□□□□ -0.29
CX3CL1P78423 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.22□□□□□ -0.29
CX3CL1P78423 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 AL662844.4-201ENST00000606367 2838 ntBASIC13.22□□□□□ -0.29
CX3CL1P78423 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.22□□□□□ -0.29
CX3CL1P78423 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CX3CL1P78423 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.22□□□□□ -0.29
CX3CL1P78423 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.22□□□□□ -0.29
CX3CL1P78423 AL031731.1-201ENST00000642131 2094 ntBASIC13.22□□□□□ -0.29
CX3CL1P78423 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CX3CL1P78423 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CX3CL1P78423 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CX3CL1P78423 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CX3CL1P78423 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CX3CL1P78423 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CX3CL1P78423 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CX3CL1P78423 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.21□□□□□ -0.29
CX3CL1P78423 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CX3CL1P78423 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CX3CL1P78423 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CX3CL1P78423 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.21□□□□□ -0.29
CX3CL1P78423 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CX3CL1P78423 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CX3CL1P78423 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CX3CL1P78423 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CX3CL1P78423 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CX3CL1P78423 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CX3CL1P78423 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.21□□□□□ -0.29
CX3CL1P78423 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms