Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HIST1H3AP68431 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HIST1H3AP68431 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 CDC14C-201ENST00000428251 1719 ntBASIC14.29□□□□□ -0.12
HIST1H3AP68431 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 AC112504.1-201ENST00000623415 1841 ntBASIC14.29□□□□□ -0.12
HIST1H3AP68431 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 AC245100.5-201ENST00000452108 331 ntBASIC14.29□□□□□ -0.12
HIST1H3AP68431 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 PRYP6-201ENST00000514804 343 ntBASIC14.29□□□□□ -0.12
HIST1H3AP68431 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 RARRES2P8-201ENST00000566335 367 ntBASIC14.29□□□□□ -0.12
HIST1H3AP68431 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 AKAP8P1-201ENST00000434743 1349 ntBASIC14.29□□□□□ -0.12
HIST1H3AP68431 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 AC008677.1-201ENST00000519230 1561 ntBASIC14.29□□□□□ -0.12
HIST1H3AP68431 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.29□□□□□ -0.12
HIST1H3AP68431 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HIST1H3AP68431 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H3AP68431 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H3AP68431 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.28□□□□□ -0.12
HIST1H3AP68431 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H3AP68431 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HIST1H3AP68431 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HIST1H3AP68431 MIR574-201ENST00000385209 96 ntBASIC14.28□□□□□ -0.12
HIST1H3AP68431 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.28□□□□□ -0.12
HIST1H3AP68431 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H3AP68431 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HIST1H3AP68431 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H3AP68431 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H3AP68431 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.28□□□□□ -0.12
HIST1H3AP68431 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HIST1H3AP68431 PGAM5P1-201ENST00000518923 814 ntBASIC14.28□□□□□ -0.12
HIST1H3AP68431 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.28□□□□□ -0.12
HIST1H3AP68431 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.28□□□□□ -0.12
HIST1H3AP68431 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.28□□□□□ -0.12
HIST1H3AP68431 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.28□□□□□ -0.12
HIST1H3AP68431 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
HIST1H3AP68431 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HIST1H3AP68431 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HIST1H3AP68431 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H3AP68431 AC007950.2-201ENST00000615045 2347 ntBASIC14.27□□□□□ -0.12
HIST1H3AP68431 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H3AP68431 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H3AP68431 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H3AP68431 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H3AP68431 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H3AP68431 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H3AP68431 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.27□□□□□ -0.12
HIST1H3AP68431 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H3AP68431 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H3AP68431 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H3AP68431 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H3AP68431 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.27□□□□□ -0.12
HIST1H3AP68431 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H3AP68431 PMS2P7-201ENST00000506558 1336 ntBASIC14.27□□□□□ -0.12
HIST1H3AP68431 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HIST1H3AP68431 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H3AP68431 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms