Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 KRT8P26-201ENST00000534154 1276 ntBASIC11.62□□□□□ -0.55
RPL39P62891 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC11.62□□□□□ -0.55
RPL39P62891 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC11.62□□□□□ -0.55
RPL39P62891 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.62□□□□□ -0.55
RPL39P62891 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC11.62□□□□□ -0.55
RPL39P62891 AL590326.2-201ENST00000625139 305 ntBASIC11.62□□□□□ -0.55
RPL39P62891 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.62□□□□□ -0.55
RPL39P62891 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
RPL39P62891 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC11.62□□□□□ -0.55
RPL39P62891 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
RPL39P62891 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.62□□□□□ -0.55
RPL39P62891 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
RPL39P62891 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC11.62□□□□□ -0.55
RPL39P62891 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC11.62□□□□□ -0.55
RPL39P62891 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.62□□□□□ -0.55
RPL39P62891 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC11.62□□□□□ -0.55
RPL39P62891 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC11.62□□□□□ -0.55
RPL39P62891 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.62□□□□□ -0.55
RPL39P62891 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC11.62□□□□□ -0.55
RPL39P62891 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.62□□□□□ -0.55
RPL39P62891 AC016027.1-202ENST00000607927 1699 ntBASIC11.62□□□□□ -0.55
RPL39P62891 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC11.62□□□□□ -0.55
RPL39P62891 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RPL39P62891 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.61□□□□□ -0.55
RPL39P62891 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
RPL39P62891 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC11.61□□□□□ -0.55
RPL39P62891 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.61□□□□□ -0.55
RPL39P62891 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC11.61□□□□□ -0.55
RPL39P62891 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
RPL39P62891 CCS-201ENST00000310190 942 ntTSL 5 BASIC11.61□□□□□ -0.55
RPL39P62891 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.61□□□□□ -0.55
RPL39P62891 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC11.61□□□□□ -0.55
RPL39P62891 AC005521.1-201ENST00000393351 872 ntBASIC11.61□□□□□ -0.55
RPL39P62891 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.61□□□□□ -0.55
RPL39P62891 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.61□□□□□ -0.55
RPL39P62891 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
RPL39P62891 SRP19-202ENST00000445150 833 ntTSL 2 BASIC11.61□□□□□ -0.55
RPL39P62891 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC11.61□□□□□ -0.55
RPL39P62891 AL671277.2-201ENST00000458060 996 ntBASIC11.61□□□□□ -0.55
RPL39P62891 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC11.61□□□□□ -0.55
RPL39P62891 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.61□□□□□ -0.55
RPL39P62891 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.61□□□□□ -0.55
RPL39P62891 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.61□□□□□ -0.55
RPL39P62891 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.61□□□□□ -0.55
RPL39P62891 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11.61□□□□□ -0.55
RPL39P62891 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.61□□□□□ -0.55
RPL39P62891 AP000867.4-201ENST00000641616 219 ntBASIC11.61□□□□□ -0.55
RPL39P62891 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
RPL39P62891 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.61□□□□□ -0.55
RPL39P62891 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC11.61□□□□□ -0.55
RPL39P62891 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
RPL39P62891 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RPL39P62891 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
RPL39P62891 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC11.61□□□□□ -0.55
RPL39P62891 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.61□□□□□ -0.55
RPL39P62891 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
RPL39P62891 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
RPL39P62891 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 MYO15B-237ENST00000642007 4893 ntBASIC11.6□□□□□ -0.55
RPL39P62891 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RPL39P62891 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms