Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 UGT1A2P-201ENST00000454886 866 ntBASIC18.72■□□□□ 0.59
CHMP4BP1P59074 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 AC015911.4-201ENST00000588022 1070 ntBASIC18.72■□□□□ 0.59
CHMP4BP1P59074 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 AP001350.2-201ENST00000625104 1094 ntBASIC18.72■□□□□ 0.59
CHMP4BP1P59074 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CHMP4BP1P59074 AC131009.4-201ENST00000624048 1740 ntBASIC18.71■□□□□ 0.59
CHMP4BP1P59074 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 AC006449.5-201ENST00000610658 2098 ntBASIC18.71■□□□□ 0.59
CHMP4BP1P59074 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 AL512356.2-201ENST00000546955 174 ntBASIC18.71■□□□□ 0.59
CHMP4BP1P59074 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 KRT8P23-201ENST00000560090 1207 ntBASIC18.71■□□□□ 0.59
CHMP4BP1P59074 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHMP4BP1P59074 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 SPDYE7P-202ENST00000420373 878 ntBASIC18.7■□□□□ 0.58
CHMP4BP1P59074 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 AC109635.5-201ENST00000533593 962 ntBASIC18.7■□□□□ 0.58
CHMP4BP1P59074 ALG1L8P-201ENST00000533887 760 ntBASIC18.7■□□□□ 0.58
CHMP4BP1P59074 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 AL138918.1-201ENST00000568306 659 ntBASIC18.7■□□□□ 0.58
CHMP4BP1P59074 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHMP4BP1P59074 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHMP4BP1P59074 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms