Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC1A6P48664 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC1A6P48664 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A6P48664 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.12■□□□□ 0.17
SLC1A6P48664 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A6P48664 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A6P48664 AL049597.2-201ENST00000565575 961 ntBASIC16.12■□□□□ 0.17
SLC1A6P48664 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.12■□□□□ 0.17
SLC1A6P48664 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A6P48664 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.12■□□□□ 0.17
SLC1A6P48664 MTDHP3-201ENST00000594186 672 ntBASIC16.12■□□□□ 0.17
SLC1A6P48664 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.12■□□□□ 0.17
SLC1A6P48664 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC1A6P48664 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC1A6P48664 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SLC1A6P48664 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SLC1A6P48664 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SLC1A6P48664 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC1A6P48664 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC1A6P48664 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A6P48664 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SLC1A6P48664 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SLC1A6P48664 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC1A6P48664 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A6P48664 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC1A6P48664 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 AL136379.1-201ENST00000623471 2642 ntBASIC16.11■□□□□ 0.17
SLC1A6P48664 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A6P48664 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC1A6P48664 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC1A6P48664 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SLC1A6P48664 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC1A6P48664 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A6P48664 MTDHP4-201ENST00000600287 670 ntBASIC16.11■□□□□ 0.17
SLC1A6P48664 AC092119.3-201ENST00000612618 583 ntBASIC16.11■□□□□ 0.17
SLC1A6P48664 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 AL805961.1-202ENST00000641562 540 ntBASIC16.11■□□□□ 0.17
SLC1A6P48664 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC1A6P48664 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
SLC1A6P48664 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SLC1A6P48664 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC1A6P48664 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
SLC1A6P48664 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A6P48664 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC1A6P48664 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC1A6P48664 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.1■□□□□ 0.17
SLC1A6P48664 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
SLC1A6P48664 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A6P48664 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC1A6P48664 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A6P48664 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A6P48664 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC1A6P48664 AC020658.6-201ENST00000623564 1870 ntBASIC16.1■□□□□ 0.17
SLC1A6P48664 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC1A6P48664 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC1A6P48664 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms