Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
HADHAP40939 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.58■□□□□ 0.25
HADHAP40939 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HADHAP40939 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HADHAP40939 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HADHAP40939 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.58■□□□□ 0.24
HADHAP40939 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.58■□□□□ 0.24
HADHAP40939 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.58■□□□□ 0.24
HADHAP40939 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.58■□□□□ 0.24
HADHAP40939 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.58■□□□□ 0.24
HADHAP40939 AC040169.1-201ENST00000565382 521 ntBASIC16.58■□□□□ 0.24
HADHAP40939 AC006538.3-201ENST00000612495 578 ntBASIC16.58■□□□□ 0.24
HADHAP40939 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.58■□□□□ 0.24
HADHAP40939 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HADHAP40939 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HADHAP40939 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.58■□□□□ 0.24
HADHAP40939 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.58■□□□□ 0.24
HADHAP40939 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
HADHAP40939 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HADHAP40939 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.58■□□□□ 0.24
HADHAP40939 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HADHAP40939 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HADHAP40939 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HADHAP40939 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HADHAP40939 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HADHAP40939 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HADHAP40939 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HADHAP40939 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HADHAP40939 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HADHAP40939 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.57■□□□□ 0.24
HADHAP40939 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HADHAP40939 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HADHAP40939 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HADHAP40939 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HADHAP40939 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HADHAP40939 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
HADHAP40939 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.57■□□□□ 0.24
HADHAP40939 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HADHAP40939 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HADHAP40939 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.57■□□□□ 0.24
HADHAP40939 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.57■□□□□ 0.24
HADHAP40939 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HADHAP40939 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.57■□□□□ 0.24
HADHAP40939 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.57■□□□□ 0.24
HADHAP40939 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HADHAP40939 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HADHAP40939 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HADHAP40939 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.57■□□□□ 0.24
HADHAP40939 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HADHAP40939 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HADHAP40939 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
HADHAP40939 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HADHAP40939 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HADHAP40939 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HADHAP40939 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.56■□□□□ 0.24
HADHAP40939 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HADHAP40939 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HADHAP40939 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.56■□□□□ 0.24
HADHAP40939 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HADHAP40939 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.56■□□□□ 0.24
HADHAP40939 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HADHAP40939 AC002056.1-201ENST00000395613 760 ntBASIC16.56■□□□□ 0.24
HADHAP40939 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.56■□□□□ 0.24
HADHAP40939 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
HADHAP40939 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.56■□□□□ 0.24
HADHAP40939 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.56■□□□□ 0.24
HADHAP40939 AC092474.2-201ENST00000424288 719 ntBASIC16.56■□□□□ 0.24
HADHAP40939 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.56■□□□□ 0.24
HADHAP40939 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.56■□□□□ 0.24
HADHAP40939 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.56■□□□□ 0.24
HADHAP40939 AL513190.1-201ENST00000621254 727 ntBASIC16.56■□□□□ 0.24
HADHAP40939 AL161645.1-201ENST00000622716 1255 ntBASIC16.56■□□□□ 0.24
HADHAP40939 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.56■□□□□ 0.24
HADHAP40939 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HADHAP40939 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HADHAP40939 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HADHAP40939 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HADHAP40939 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HADHAP40939 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
HADHAP40939 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HADHAP40939 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HADHAP40939 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HADHAP40939 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms