Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15□□□□□ -0.01
RFC3P40938 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15□□□□□ -0.01
RFC3P40938 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15□□□□□ -0.01
RFC3P40938 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15□□□□□ -0.01
RFC3P40938 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RFC3P40938 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15□□□□□ -0.01
RFC3P40938 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RFC3P40938 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RFC3P40938 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
RFC3P40938 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RFC3P40938 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.99□□□□□ -0.01
RFC3P40938 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RFC3P40938 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RFC3P40938 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.99□□□□□ -0.01
RFC3P40938 LINC00554-201ENST00000564841 3011 ntBASIC14.99□□□□□ -0.01
RFC3P40938 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RFC3P40938 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RFC3P40938 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.99□□□□□ -0.01
RFC3P40938 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RFC3P40938 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RFC3P40938 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.99□□□□□ -0.01
RFC3P40938 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.99□□□□□ -0.01
RFC3P40938 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.99□□□□□ -0.01
RFC3P40938 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.99□□□□□ -0.01
RFC3P40938 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.99□□□□□ -0.01
RFC3P40938 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.99□□□□□ -0.01
RFC3P40938 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.99□□□□□ -0.01
RFC3P40938 AC018529.1-201ENST00000613063 361 ntBASIC14.99□□□□□ -0.01
RFC3P40938 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.99□□□□□ -0.01
RFC3P40938 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.99□□□□□ -0.01
RFC3P40938 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.99□□□□□ -0.01
RFC3P40938 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 PCDHA1-201ENST00000378133 2726 ntBASIC14.99□□□□□ -0.01
RFC3P40938 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFC3P40938 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RFC3P40938 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RFC3P40938 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.98□□□□□ -0.01
RFC3P40938 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RFC3P40938 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC3P40938 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RFC3P40938 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RFC3P40938 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC3P40938 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RFC3P40938 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.98□□□□□ -0.01
RFC3P40938 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC3P40938 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 AC097493.3-201ENST00000509725 367 ntBASIC14.98□□□□□ -0.01
RFC3P40938 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.98□□□□□ -0.01
RFC3P40938 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFC3P40938 AC073389.1-201ENST00000595595 795 ntBASIC14.98□□□□□ -0.01
RFC3P40938 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.98□□□□□ -0.01
RFC3P40938 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms