Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.18■□□□□ 0.34
RARAP10276 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RARAP10276 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.18■□□□□ 0.34
RARAP10276 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.18■□□□□ 0.34
RARAP10276 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RARAP10276 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RARAP10276 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.18■□□□□ 0.34
RARAP10276 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.18■□□□□ 0.34
RARAP10276 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.18■□□□□ 0.34
RARAP10276 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RARAP10276 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.18■□□□□ 0.34
RARAP10276 KRT19P2-202ENST00000557173 1012 ntBASIC17.18■□□□□ 0.34
RARAP10276 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.18■□□□□ 0.34
RARAP10276 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.18■□□□□ 0.34
RARAP10276 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.18■□□□□ 0.34
RARAP10276 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
RARAP10276 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.18■□□□□ 0.34
RARAP10276 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
RARAP10276 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RARAP10276 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RARAP10276 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RARAP10276 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.17■□□□□ 0.34
RARAP10276 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.17■□□□□ 0.34
RARAP10276 ZNF259P1-201ENST00000407656 1365 ntBASIC17.17■□□□□ 0.34
RARAP10276 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RARAP10276 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
RARAP10276 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RARAP10276 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RARAP10276 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RARAP10276 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RARAP10276 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RARAP10276 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RARAP10276 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.17■□□□□ 0.34
RARAP10276 AC109635.5-201ENST00000533593 962 ntBASIC17.17■□□□□ 0.34
RARAP10276 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.17■□□□□ 0.34
RARAP10276 AC106730.1-201ENST00000566722 1090 ntBASIC17.17■□□□□ 0.34
RARAP10276 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.17■□□□□ 0.34
RARAP10276 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.17■□□□□ 0.34
RARAP10276 AC005622.1-201ENST00000636801 1703 ntBASIC17.17■□□□□ 0.34
RARAP10276 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RARAP10276 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RARAP10276 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RARAP10276 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.17■□□□□ 0.34
RARAP10276 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.17■□□□□ 0.34
RARAP10276 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.17■□□□□ 0.34
RARAP10276 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RARAP10276 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RARAP10276 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RARAP10276 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RARAP10276 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RARAP10276 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
RARAP10276 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RARAP10276 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RARAP10276 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.16■□□□□ 0.34
RARAP10276 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RARAP10276 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.16■□□□□ 0.34
RARAP10276 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.16■□□□□ 0.34
RARAP10276 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.16■□□□□ 0.34
RARAP10276 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RARAP10276 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RARAP10276 AC092474.2-201ENST00000424288 719 ntBASIC17.16■□□□□ 0.34
RARAP10276 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.16■□□□□ 0.34
RARAP10276 AC140658.5-201ENST00000438532 169 ntBASIC17.16■□□□□ 0.34
RARAP10276 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.16■□□□□ 0.34
RARAP10276 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.16■□□□□ 0.34
RARAP10276 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RARAP10276 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.16■□□□□ 0.34
RARAP10276 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RARAP10276 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.16■□□□□ 0.34
RARAP10276 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.16■□□□□ 0.34
RARAP10276 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
RARAP10276 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms