Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TUBB4AP04350 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB4AP04350 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TUBB4AP04350 AC005521.1-201ENST00000393351 872 ntBASIC17.57■□□□□ 0.4
TUBB4AP04350 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.57■□□□□ 0.4
TUBB4AP04350 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.57■□□□□ 0.4
TUBB4AP04350 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.57■□□□□ 0.4
TUBB4AP04350 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.57■□□□□ 0.4
TUBB4AP04350 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.57■□□□□ 0.4
TUBB4AP04350 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TUBB4AP04350 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
TUBB4AP04350 RN7SL850P-201ENST00000579959 291 ntBASIC17.57■□□□□ 0.4
TUBB4AP04350 AC090616.6-201ENST00000582640 721 ntBASIC17.57■□□□□ 0.4
TUBB4AP04350 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TUBB4AP04350 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TUBB4AP04350 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TUBB4AP04350 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB4AP04350 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB4AP04350 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TUBB4AP04350 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB4AP04350 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TUBB4AP04350 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TUBB4AP04350 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB4AP04350 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB4AP04350 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TUBB4AP04350 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TUBB4AP04350 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.56■□□□□ 0.4
TUBB4AP04350 U82695.1-201ENST00000635752 1889 ntBASIC17.56■□□□□ 0.4
TUBB4AP04350 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TUBB4AP04350 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.56■□□□□ 0.4
TUBB4AP04350 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.56■□□□□ 0.4
TUBB4AP04350 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.56■□□□□ 0.4
TUBB4AP04350 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.56■□□□□ 0.4
TUBB4AP04350 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
TUBB4AP04350 AC105250.1-201ENST00000509378 2057 ntBASIC17.56■□□□□ 0.4
TUBB4AP04350 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TUBB4AP04350 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.56■□□□□ 0.4
TUBB4AP04350 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.56■□□□□ 0.4
TUBB4AP04350 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
TUBB4AP04350 LIN28AP1-201ENST00000429574 405 ntBASIC17.56■□□□□ 0.4
TUBB4AP04350 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.56■□□□□ 0.4
TUBB4AP04350 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.56■□□□□ 0.4
TUBB4AP04350 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.56■□□□□ 0.4
TUBB4AP04350 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.56■□□□□ 0.4
TUBB4AP04350 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TUBB4AP04350 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.56■□□□□ 0.4
TUBB4AP04350 AC090616.6-203ENST00000579186 1945 ntBASIC17.56■□□□□ 0.4
TUBB4AP04350 AC011477.6-201ENST00000604980 1927 ntBASIC17.56■□□□□ 0.4
TUBB4AP04350 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TUBB4AP04350 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TUBB4AP04350 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.55■□□□□ 0.4
TUBB4AP04350 AC005622.1-201ENST00000636801 1703 ntBASIC17.55■□□□□ 0.4
TUBB4AP04350 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB4AP04350 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB4AP04350 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TUBB4AP04350 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB4AP04350 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB4AP04350 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.55■□□□□ 0.4
TUBB4AP04350 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.55■□□□□ 0.4
TUBB4AP04350 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TUBB4AP04350 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB4AP04350 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.55■□□□□ 0.4
TUBB4AP04350 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB4AP04350 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB4AP04350 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.55■□□□□ 0.4
TUBB4AP04350 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB4AP04350 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB4AP04350 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB4AP04350 TERF1P1-201ENST00000311003 1181 ntBASIC17.55■□□□□ 0.4
TUBB4AP04350 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB4AP04350 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.55■□□□□ 0.4
TUBB4AP04350 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TUBB4AP04350 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.55■□□□□ 0.4
TUBB4AP04350 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.55■□□□□ 0.4
TUBB4AP04350 ATP5G1P1-201ENST00000448724 379 ntBASIC17.55■□□□□ 0.4
TUBB4AP04350 AC010331.1-201ENST00000611423 582 ntBASIC17.55■□□□□ 0.4
TUBB4AP04350 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TUBB4AP04350 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TUBB4AP04350 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TUBB4AP04350 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TUBB4AP04350 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.55■□□□□ 0.4
TUBB4AP04350 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.55■□□□□ 0.4
TUBB4AP04350 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms