Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TOMM40O96008 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TOMM40O96008 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TOMM40O96008 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TOMM40O96008 AC126177.1-201ENST00000547829 2218 ntBASIC12.88□□□□□ -0.35
TOMM40O96008 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TOMM40O96008 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.88□□□□□ -0.35
TOMM40O96008 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TOMM40O96008 AC068587.6-202ENST00000641839 5619 ntBASIC12.87□□□□□ -0.35
TOMM40O96008 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
TOMM40O96008 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.87□□□□□ -0.35
TOMM40O96008 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.87□□□□□ -0.35
TOMM40O96008 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.87□□□□□ -0.35
TOMM40O96008 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.87□□□□□ -0.35
TOMM40O96008 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.87□□□□□ -0.35
TOMM40O96008 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.87□□□□□ -0.35
TOMM40O96008 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 AC073621.1-201ENST00000392730 636 ntBASIC12.87□□□□□ -0.35
TOMM40O96008 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.87□□□□□ -0.35
TOMM40O96008 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.87□□□□□ -0.35
TOMM40O96008 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
TOMM40O96008 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.87□□□□□ -0.35
TOMM40O96008 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.87□□□□□ -0.35
TOMM40O96008 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.87□□□□□ -0.35
TOMM40O96008 AC010654.1-201ENST00000615722 808 ntBASIC12.87□□□□□ -0.35
TOMM40O96008 PGM5P2-202ENST00000637225 1043 ntBASIC12.87□□□□□ -0.35
TOMM40O96008 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TOMM40O96008 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.87□□□□□ -0.35
TOMM40O96008 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
TOMM40O96008 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
TOMM40O96008 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 AL009178.2-201ENST00000597278 2719 ntBASIC12.87□□□□□ -0.35
TOMM40O96008 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.87□□□□□ -0.35
TOMM40O96008 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.87□□□□□ -0.35
TOMM40O96008 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TOMM40O96008 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.87□□□□□ -0.35
TOMM40O96008 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TOMM40O96008 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.86□□□□□ -0.35
TOMM40O96008 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
TOMM40O96008 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
TOMM40O96008 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.86□□□□□ -0.35
TOMM40O96008 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 AL137784.3-201ENST00000623858 2288 ntBASIC12.86□□□□□ -0.35
TOMM40O96008 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TOMM40O96008 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TOMM40O96008 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.86□□□□□ -0.35
TOMM40O96008 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.86□□□□□ -0.35
TOMM40O96008 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.86□□□□□ -0.35
TOMM40O96008 RPS2P1-201ENST00000434010 821 ntBASIC12.86□□□□□ -0.35
TOMM40O96008 IGHV3-65-201ENST00000523210 341 ntBASIC12.86□□□□□ -0.35
TOMM40O96008 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.86□□□□□ -0.35
TOMM40O96008 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
TOMM40O96008 IFNL4P1-201ENST00000607083 540 ntBASIC12.86□□□□□ -0.35
TOMM40O96008 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TOMM40O96008 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TOMM40O96008 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TOMM40O96008 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms