Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 AC005034.1-201ENST00000426657 489 ntBASIC18.29■□□□□ 0.52
GGPS1O95749 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.29■□□□□ 0.52
GGPS1O95749 AP005018.1-201ENST00000525475 301 ntBASIC18.29■□□□□ 0.52
GGPS1O95749 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.29■□□□□ 0.52
GGPS1O95749 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.29■□□□□ 0.52
GGPS1O95749 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.29■□□□□ 0.52
GGPS1O95749 AL035252.4-201ENST00000624174 288 ntBASIC18.29■□□□□ 0.52
GGPS1O95749 AC004840.1-201ENST00000636359 365 ntBASIC18.29■□□□□ 0.52
GGPS1O95749 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
GGPS1O95749 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
GGPS1O95749 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.29■□□□□ 0.52
GGPS1O95749 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
GGPS1O95749 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
GGPS1O95749 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GGPS1O95749 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.29■□□□□ 0.52
GGPS1O95749 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.29■□□□□ 0.52
GGPS1O95749 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.28■□□□□ 0.52
GGPS1O95749 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.28■□□□□ 0.52
GGPS1O95749 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
GGPS1O95749 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
GGPS1O95749 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
GGPS1O95749 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
GGPS1O95749 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.28■□□□□ 0.52
GGPS1O95749 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.28■□□□□ 0.52
GGPS1O95749 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.28■□□□□ 0.52
GGPS1O95749 RN7SL618P-201ENST00000477850 296 ntBASIC18.28■□□□□ 0.52
GGPS1O95749 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.28■□□□□ 0.52
GGPS1O95749 AL512361.1-201ENST00000554200 418 ntBASIC18.28■□□□□ 0.52
GGPS1O95749 AC005225.4-201ENST00000557330 545 ntBASIC18.28■□□□□ 0.52
GGPS1O95749 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GGPS1O95749 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.28■□□□□ 0.52
GGPS1O95749 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.28■□□□□ 0.52
GGPS1O95749 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GGPS1O95749 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.28■□□□□ 0.52
GGPS1O95749 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
GGPS1O95749 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.28■□□□□ 0.52
GGPS1O95749 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
GGPS1O95749 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GGPS1O95749 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GGPS1O95749 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GGPS1O95749 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
GGPS1O95749 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
GGPS1O95749 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.27■□□□□ 0.52
GGPS1O95749 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
GGPS1O95749 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.27■□□□□ 0.52
GGPS1O95749 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
GGPS1O95749 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GGPS1O95749 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GGPS1O95749 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GGPS1O95749 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.27■□□□□ 0.52
GGPS1O95749 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.27■□□□□ 0.52
GGPS1O95749 AC010336.2-201ENST00000564226 506 ntBASIC18.27■□□□□ 0.52
GGPS1O95749 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.27■□□□□ 0.52
GGPS1O95749 SPDYE22P-201ENST00000582158 798 ntBASIC18.27■□□□□ 0.52
GGPS1O95749 AL662799.1-202ENST00000614205 422 ntBASIC18.27■□□□□ 0.52
GGPS1O95749 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
GGPS1O95749 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GGPS1O95749 TNRC18P3-201ENST00000441896 2691 ntBASIC18.27■□□□□ 0.52
GGPS1O95749 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GGPS1O95749 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.27■□□□□ 0.52
GGPS1O95749 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GGPS1O95749 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
GGPS1O95749 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.27■□□□□ 0.51
GGPS1O95749 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
GGPS1O95749 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GGPS1O95749 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GGPS1O95749 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
GGPS1O95749 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.26■□□□□ 0.51
GGPS1O95749 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GGPS1O95749 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GGPS1O95749 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GGPS1O95749 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.26■□□□□ 0.51
GGPS1O95749 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
GGPS1O95749 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GGPS1O95749 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GGPS1O95749 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms