Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
RTN3O95197 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RTN3O95197 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
RTN3O95197 PCGF3-213ENST00000620529 1899 ntBASIC17.26■□□□□ 0.35
RTN3O95197 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.26■□□□□ 0.35
RTN3O95197 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RTN3O95197 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.26■□□□□ 0.35
RTN3O95197 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
RTN3O95197 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTN3O95197 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTN3O95197 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.25■□□□□ 0.35
RTN3O95197 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RTN3O95197 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTN3O95197 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTN3O95197 HLA-A-202ENST00000376806 1854 ntBASIC17.25■□□□□ 0.35
RTN3O95197 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RTN3O95197 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RTN3O95197 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RTN3O95197 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTN3O95197 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RTN3O95197 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTN3O95197 MIR770-201ENST00000390219 98 ntBASIC17.25■□□□□ 0.35
RTN3O95197 AC107890.1-201ENST00000422478 521 ntBASIC17.25■□□□□ 0.35
RTN3O95197 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.25■□□□□ 0.35
RTN3O95197 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.25■□□□□ 0.35
RTN3O95197 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.25■□□□□ 0.35
RTN3O95197 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTN3O95197 AC125807.1-201ENST00000483097 614 ntBASIC17.25■□□□□ 0.35
RTN3O95197 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.25■□□□□ 0.35
RTN3O95197 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.25■□□□□ 0.35
RTN3O95197 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTN3O95197 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RTN3O95197 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RTN3O95197 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.25■□□□□ 0.35
RTN3O95197 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.25■□□□□ 0.35
RTN3O95197 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTN3O95197 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
RTN3O95197 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RTN3O95197 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTN3O95197 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTN3O95197 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN3O95197 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.24■□□□□ 0.35
RTN3O95197 LINC01144-201ENST00000626198 1710 ntBASIC17.24■□□□□ 0.35
RTN3O95197 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN3O95197 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN3O95197 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN3O95197 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN3O95197 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN3O95197 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.24■□□□□ 0.35
RTN3O95197 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.24■□□□□ 0.35
RTN3O95197 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.24■□□□□ 0.35
RTN3O95197 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN3O95197 GGT3P-204ENST00000453783 1664 ntBASIC17.24■□□□□ 0.35
RTN3O95197 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.24■□□□□ 0.35
RTN3O95197 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTN3O95197 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RTN3O95197 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.24■□□□□ 0.35
RTN3O95197 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.24■□□□□ 0.35
RTN3O95197 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.24■□□□□ 0.35
RTN3O95197 AC140878.1-201ENST00000565277 250 ntBASIC17.24■□□□□ 0.35
RTN3O95197 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN3O95197 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN3O95197 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN3O95197 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RTN3O95197 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.24■□□□□ 0.35
RTN3O95197 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN3O95197 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.24■□□□□ 0.35
RTN3O95197 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RTN3O95197 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN3O95197 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
RTN3O95197 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTN3O95197 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.24■□□□□ 0.35
RTN3O95197 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.24■□□□□ 0.35
RTN3O95197 RNF216P1-203ENST00000404404 2427 ntBASIC17.23■□□□□ 0.35
RTN3O95197 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
RTN3O95197 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN3O95197 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
RTN3O95197 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN3O95197 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN3O95197 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN3O95197 LINC02199-201ENST00000506655 2702 ntBASIC17.23■□□□□ 0.35
RTN3O95197 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RTN3O95197 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN3O95197 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.23■□□□□ 0.35
RTN3O95197 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN3O95197 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN3O95197 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RTN3O95197 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RTN3O95197 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RTN3O95197 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.23■□□□□ 0.35
RTN3O95197 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.23■□□□□ 0.35
RTN3O95197 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.23■□□□□ 0.35
RTN3O95197 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.23■□□□□ 0.35
RTN3O95197 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.23■□□□□ 0.35
RTN3O95197 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.23■□□□□ 0.35
RTN3O95197 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms