Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ZIC3O60481 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
ZIC3O60481 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 AC006449.6-201ENST00000612330 2296 ntBASIC14.66□□□□□ -0.06
ZIC3O60481 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.66□□□□□ -0.06
ZIC3O60481 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.66□□□□□ -0.06
ZIC3O60481 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
ZIC3O60481 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.66□□□□□ -0.06
ZIC3O60481 TREML5P-201ENST00000421694 576 ntBASIC14.66□□□□□ -0.06
ZIC3O60481 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.66□□□□□ -0.06
ZIC3O60481 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.66□□□□□ -0.06
ZIC3O60481 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.66□□□□□ -0.06
ZIC3O60481 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.66□□□□□ -0.06
ZIC3O60481 AC005498.2-205ENST00000593218 784 ntBASIC14.66□□□□□ -0.06
ZIC3O60481 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.66□□□□□ -0.06
ZIC3O60481 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
ZIC3O60481 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.66□□□□□ -0.06
ZIC3O60481 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.66□□□□□ -0.06
ZIC3O60481 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.66□□□□□ -0.06
ZIC3O60481 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.66□□□□□ -0.06
ZIC3O60481 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.65□□□□□ -0.06
ZIC3O60481 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.65□□□□□ -0.06
ZIC3O60481 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.65□□□□□ -0.06
ZIC3O60481 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ZIC3O60481 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ZIC3O60481 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
ZIC3O60481 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.65□□□□□ -0.06
ZIC3O60481 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.65□□□□□ -0.06
ZIC3O60481 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 MIR770-201ENST00000390219 98 ntBASIC14.65□□□□□ -0.06
ZIC3O60481 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.65□□□□□ -0.06
ZIC3O60481 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.65□□□□□ -0.06
ZIC3O60481 AC092580.3-201ENST00000430932 139 ntBASIC14.65□□□□□ -0.06
ZIC3O60481 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 MTND6P24-201ENST00000440466 518 ntBASIC14.65□□□□□ -0.06
ZIC3O60481 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
ZIC3O60481 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.65□□□□□ -0.06
ZIC3O60481 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.65□□□□□ -0.06
ZIC3O60481 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ZIC3O60481 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.65□□□□□ -0.06
ZIC3O60481 AL158211.3-201ENST00000607385 239 ntBASIC14.65□□□□□ -0.06
ZIC3O60481 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.65□□□□□ -0.06
ZIC3O60481 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.65□□□□□ -0.06
ZIC3O60481 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
ZIC3O60481 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.65□□□□□ -0.06
ZIC3O60481 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
ZIC3O60481 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ZIC3O60481 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.65□□□□□ -0.06
ZIC3O60481 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZIC3O60481 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC3O60481 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ZIC3O60481 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.64□□□□□ -0.07
ZIC3O60481 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC3O60481 AL118508.1-201ENST00000613502 2345 ntBASIC14.64□□□□□ -0.07
ZIC3O60481 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC3O60481 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
ZIC3O60481 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZIC3O60481 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ZIC3O60481 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.64□□□□□ -0.07
ZIC3O60481 AL139010.1-201ENST00000454878 894 ntBASIC14.64□□□□□ -0.07
ZIC3O60481 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms