Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC087499.5-201ENST00000452760 1342 ntBASIC16.21■□□□□ 0.19
PCDHGA12O60330 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGA12O60330 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA12O60330 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGA12O60330 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA12O60330 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA12O60330 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA12O60330 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA12O60330 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
PCDHGA12O60330 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA12O60330 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA12O60330 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PCDHGA12O60330 SLC25A1P3-201ENST00000395415 828 ntBASIC16.21■□□□□ 0.19
PCDHGA12O60330 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA12O60330 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA12O60330 PRYP6-201ENST00000514804 343 ntBASIC16.21■□□□□ 0.19
PCDHGA12O60330 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHGA12O60330 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHGA12O60330 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGA12O60330 MIR6752-201ENST00000618442 71 ntBASIC16.21■□□□□ 0.19
PCDHGA12O60330 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHGA12O60330 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGA12O60330 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGA12O60330 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA12O60330 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGA12O60330 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGA12O60330 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHGA12O60330 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.21■□□□□ 0.18
PCDHGA12O60330 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHGA12O60330 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
PCDHGA12O60330 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 FAM220BP-201ENST00000377689 816 ntBASIC16.2■□□□□ 0.18
PCDHGA12O60330 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGA12O60330 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGA12O60330 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 FRMD8P1-201ENST00000440433 1524 ntBASIC16.19■□□□□ 0.18
PCDHGA12O60330 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 FOXO1B-201ENST00000504678 1527 ntBASIC16.19■□□□□ 0.18
PCDHGA12O60330 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms