Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.11■□□□□ 0.01
IDH3BO43837 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.11■□□□□ 0.01
IDH3BO43837 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.11■□□□□ 0.01
IDH3BO43837 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
IDH3BO43837 AC139887.3-201ENST00000568585 713 ntBASIC15.11■□□□□ 0.01
IDH3BO43837 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.11■□□□□ 0.01
IDH3BO43837 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.11■□□□□ 0.01
IDH3BO43837 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
IDH3BO43837 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 ALOX12P2-203ENST00000570921 1945 ntBASIC15.11■□□□□ 0.01
IDH3BO43837 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.11■□□□□ 0.01
IDH3BO43837 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.11■□□□□ 0.01
IDH3BO43837 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.11■□□□□ 0.01
IDH3BO43837 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
IDH3BO43837 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
IDH3BO43837 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.11■□□□□ 0.01
IDH3BO43837 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
IDH3BO43837 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.11■□□□□ 0.01
IDH3BO43837 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
IDH3BO43837 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IDH3BO43837 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.1■□□□□ 0.01
IDH3BO43837 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.1■□□□□ 0.01
IDH3BO43837 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IDH3BO43837 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
IDH3BO43837 AC138035.3-201ENST00000622706 2791 ntBASIC15.1■□□□□ 0.01
IDH3BO43837 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
IDH3BO43837 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.1■□□□□ 0.01
IDH3BO43837 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IDH3BO43837 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
IDH3BO43837 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.1■□□□□ 0.01
IDH3BO43837 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IDH3BO43837 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.1■□□□□ 0.01
IDH3BO43837 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
IDH3BO43837 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
IDH3BO43837 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.1■□□□□ 0.01
IDH3BO43837 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.1■□□□□ 0.01
IDH3BO43837 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.1■□□□□ 0.01
IDH3BO43837 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
IDH3BO43837 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IDH3BO43837 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
IDH3BO43837 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.1■□□□□ 0.01
IDH3BO43837 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
IDH3BO43837 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.1■□□□□ 0.01
IDH3BO43837 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
IDH3BO43837 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
IDH3BO43837 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
IDH3BO43837 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
IDH3BO43837 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
IDH3BO43837 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
IDH3BO43837 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.1■□□□□ 0.01
IDH3BO43837 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
IDH3BO43837 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.09■□□□□ 0.01
IDH3BO43837 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IDH3BO43837 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
IDH3BO43837 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IDH3BO43837 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
IDH3BO43837 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
IDH3BO43837 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IDH3BO43837 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IDH3BO43837 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.09■□□□□ 0.01
IDH3BO43837 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IDH3BO43837 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
IDH3BO43837 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IDH3BO43837 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
IDH3BO43837 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.09■□□□□ 0.01
IDH3BO43837 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IDH3BO43837 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IDH3BO43837 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IDH3BO43837 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
IDH3BO43837 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
IDH3BO43837 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.09■□□□□ 0.01
IDH3BO43837 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
IDH3BO43837 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.09■□□□□ 0.01
IDH3BO43837 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.09■□□□□ 0.01
IDH3BO43837 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.09■□□□□ 0.01
IDH3BO43837 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.09■□□□□ 0.01
IDH3BO43837 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.09■□□□□ 0.01
IDH3BO43837 AC091167.2-201ENST00000579581 588 ntBASIC15.09■□□□□ 0.01
IDH3BO43837 MIR4492-201ENST00000581627 80 ntBASIC15.09■□□□□ 0.01
IDH3BO43837 MTDHP3-201ENST00000594186 672 ntBASIC15.09■□□□□ 0.01
IDH3BO43837 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
IDH3BO43837 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
IDH3BO43837 AL355877.3-201ENST00000622820 899 ntBASIC15.09■□□□□ 0.01
IDH3BO43837 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
IDH3BO43837 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.09■□□□□ 0.01
IDH3BO43837 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
IDH3BO43837 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms