Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 AL845331.1-201ENST00000424978 1190 ntBASIC12.02□□□□□ -0.49
SMKR1H3BMG3 ACTG1P4-201ENST00000425123 1122 ntBASIC12.02□□□□□ -0.49
SMKR1H3BMG3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 AL592071.1-201ENST00000611956 408 ntBASIC12.02□□□□□ -0.49
SMKR1H3BMG3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 AC016027.1-202ENST00000607927 1699 ntBASIC12.02□□□□□ -0.49
SMKR1H3BMG3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 AC243591.1-201ENST00000452967 1364 ntBASIC12.02□□□□□ -0.49
SMKR1H3BMG3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 PCGF3-213ENST00000620529 1899 ntBASIC12.02□□□□□ -0.49
SMKR1H3BMG3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.02□□□□□ -0.49
SMKR1H3BMG3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 AC007686.3-201ENST00000619017 3487 ntBASIC12.01□□□□□ -0.49
SMKR1H3BMG3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 ATP5G1P1-201ENST00000448724 379 ntBASIC12.01□□□□□ -0.49
SMKR1H3BMG3 KRT18P38-201ENST00000449496 1282 ntBASIC12.01□□□□□ -0.49
SMKR1H3BMG3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 AC011840.4-201ENST00000578471 627 ntBASIC12.01□□□□□ -0.49
SMKR1H3BMG3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.01□□□□□ -0.49
SMKR1H3BMG3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12□□□□□ -0.49
SMKR1H3BMG3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12□□□□□ -0.49
SMKR1H3BMG3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMKR1H3BMG3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMKR1H3BMG3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12□□□□□ -0.49
SMKR1H3BMG3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
SMKR1H3BMG3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
SMKR1H3BMG3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
SMKR1H3BMG3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SMKR1H3BMG3 AC026748.1-201ENST00000624349 3251 ntBASIC12□□□□□ -0.49
SMKR1H3BMG3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
SMKR1H3BMG3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SMKR1H3BMG3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12□□□□□ -0.49
SMKR1H3BMG3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms