Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM6-TRIM34B2RNG4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 WASH6P-202ENST00000359512 1437 ntBASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 AL671883.3-201ENST00000603274 991 ntBASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 AC099522.2-201ENST00000607001 744 ntBASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 AC091812.2-201ENST00000619081 385 ntBASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM6-TRIM34B2RNG4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 PGAM5P1-201ENST00000518923 814 ntBASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM6-TRIM34B2RNG4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM6-TRIM34B2RNG4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM6-TRIM34B2RNG4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM6-TRIM34B2RNG4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM6-TRIM34B2RNG4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM6-TRIM34B2RNG4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
TRIM6-TRIM34B2RNG4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6-TRIM34B2RNG4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6-TRIM34B2RNG4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6-TRIM34B2RNG4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TRIM6-TRIM34B2RNG4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM6-TRIM34B2RNG4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.01■□□□□ 0.79
TRIM6-TRIM34B2RNG4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms