Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 AL080243.2-201ENST00000418783 582 ntBASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 AC005225.4-201ENST00000557330 545 ntBASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 AC012645.4-201ENST00000610691 1061 ntBASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 AL662799.1-202ENST00000614205 422 ntBASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 UBALD1-205ENST00000590891 2641 ntBASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TBC1D3FA6NER0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 SPTLC1P1-201ENST00000447199 261 ntBASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 RN7SL618P-201ENST00000477850 296 ntBASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 AP005018.1-201ENST00000525475 301 ntBASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 AC135586.1-201ENST00000539323 574 ntBASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TBC1D3FA6NER0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 U82695.1-201ENST00000635752 1889 ntBASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 NFIC-211ENST00000641145 8399 ntBASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 SERBP1P3-201ENST00000459980 809 ntBASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 AL358472.5-202ENST00000641448 1267 ntBASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms