Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.02■□□□□ 0.16
TRBV5-4A0A0C4DH59 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-4A0A0C4DH59 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-4A0A0C4DH59 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRBV5-4A0A0C4DH59 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-4A0A0C4DH59 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-4A0A0C4DH59 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV5-4A0A0C4DH59 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.02■□□□□ 0.16
TRBV5-4A0A0C4DH59 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.02■□□□□ 0.16
TRBV5-4A0A0C4DH59 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBV5-4A0A0C4DH59 BANF1P1-201ENST00000553684 263 ntBASIC16.02■□□□□ 0.16
TRBV5-4A0A0C4DH59 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV5-4A0A0C4DH59 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 AL139400.1-201ENST00000366220 510 ntBASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 AC006538.3-201ENST00000612495 578 ntBASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRBV5-4A0A0C4DH59 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 AC011477.6-201ENST00000604980 1927 ntBASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 AC007967.4-201ENST00000614700 386 ntBASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRBV5-4A0A0C4DH59 AL136982.4-201ENST00000437689 1740 ntBASIC15.99■□□□□ 0.15
TRBV5-4A0A0C4DH59 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-4A0A0C4DH59 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-4A0A0C4DH59 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TRBV5-4A0A0C4DH59 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-4A0A0C4DH59 AC010491.1-201ENST00000563101 2797 ntBASIC15.99■□□□□ 0.15
TRBV5-4A0A0C4DH59 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.99■□□□□ 0.15
TRBV5-4A0A0C4DH59 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRBV5-4A0A0C4DH59 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV5-4A0A0C4DH59 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms