Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 RNA5SP419-201ENST00000515908 135 ntBASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 IGHV3-22-201ENST00000520721 359 ntBASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 AL031432.2-201ENST00000566714 459 ntBASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 AL928711.1-201ENST00000570165 459 ntBASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 AL645728.2-201ENST00000641974 660 ntBASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV1A0A0A0MS02 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 HARS-203ENST00000431330 1774 ntTSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 CYP2T1P-202ENST00000641596 2535 ntBASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 AL031055.1-201ENST00000606362 631 ntBASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 AC020765.3-201ENST00000613051 740 ntBASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 AC007064.4-201ENST00000637740 555 ntBASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC11.92□□□□□ -0.5
TRGV1A0A0A0MS02 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 LINC01144-201ENST00000626198 1710 ntBASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TRGV1A0A0A0MS02 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms