Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 AP002414.1-201ENST00000391405 1147 ntBASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 AC108751.1-201ENST00000490852 363 ntBASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 IGHV3-65-201ENST00000523210 341 ntBASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CNOT11Q9UKZ1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CNOT11Q9UKZ1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.77■□□□□ 0.11
CNOT11Q9UKZ1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT11Q9UKZ1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CNOT11Q9UKZ1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT11Q9UKZ1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.77■□□□□ 0.11
CNOT11Q9UKZ1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT11Q9UKZ1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT11Q9UKZ1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT11Q9UKZ1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.77■□□□□ 0.11
CNOT11Q9UKZ1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT11Q9UKZ1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CNOT11Q9UKZ1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT11Q9UKZ1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT11Q9UKZ1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CNOT11Q9UKZ1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 AC112504.1-201ENST00000623415 1841 ntBASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 PMS2P1-201ENST00000431037 1228 ntBASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 AC108073.2-201ENST00000464002 357 ntBASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 KRT18P58-201ENST00000527480 1120 ntBASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 TERC-201ENST00000602385 541 ntBASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CNOT11Q9UKZ1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms