Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RIMBP3Q9UFD9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 AL121723.1-201ENST00000445194 1519 ntBASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 AC135050.7-201ENST00000624508 2218 ntBASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 RNU1-114P-201ENST00000365297 166 ntBASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 RPL17P45-201ENST00000586289 509 ntBASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
RIMBP3Q9UFD9 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 DDX39AP1-201ENST00000445147 1181 ntBASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 RPS9P1-201ENST00000419943 583 ntBASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 AP002803.1-201ENST00000528836 498 ntBASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 AC073413.1-201ENST00000603927 732 ntBASIC25.23■■□□□ 1.63
RIMBP3Q9UFD9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 AC116562.4-201ENST00000641316 2276 ntBASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 AP003171.2-201ENST00000528208 925 ntBASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 C2orf69P1-201ENST00000563532 1093 ntBASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 AP001002.3-201ENST00000623482 206 ntBASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RIMBP3Q9UFD9 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 RPL7P35-201ENST00000446943 740 ntBASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 AC079112.1-201ENST00000454972 939 ntBASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC25.21■■□□□ 1.63
RIMBP3Q9UFD9 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms