Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 FAM207CP-201ENST00000443486 507 ntBASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HDAC6Q9UBN7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 AL391005.1-201ENST00000623953 2435 ntBASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 KRT18P34-201ENST00000488218 1270 ntBASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 AC105233.2-201ENST00000523697 349 ntBASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 AF228730.5-201ENST00000530288 346 ntBASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 RARRES2P9-201ENST00000565168 469 ntBASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 AP3S2-216ENST00000617003 1561 ntBASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.5■□□□□ 0.55
HDAC6Q9UBN7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 AC073389.1-201ENST00000595595 795 ntBASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 AC018529.1-201ENST00000613063 361 ntBASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HDAC6Q9UBN7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.48■□□□□ 0.55
HDAC6Q9UBN7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HDAC6Q9UBN7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HDAC6Q9UBN7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HDAC6Q9UBN7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HDAC6Q9UBN7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HDAC6Q9UBN7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HDAC6Q9UBN7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HDAC6Q9UBN7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms