Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 GGT3P-204ENST00000453783 1664 ntBASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PPARGC1AQ9UBK2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 AC132872.4-202ENST00000622924 2756 ntBASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PPARGC1AQ9UBK2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PPARGC1AQ9UBK2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PPARGC1AQ9UBK2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.08■□□□□ 0.33
PPARGC1AQ9UBK2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
PPARGC1AQ9UBK2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PPARGC1AQ9UBK2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 AC016027.1-202ENST00000607927 1699 ntBASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 TFAMP1-201ENST00000412727 736 ntBASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 KRT18P34-201ENST00000488218 1270 ntBASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 MIR4469-201ENST00000583919 79 ntBASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms