Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NLKQ9UBE8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NLKQ9UBE8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
NLKQ9UBE8 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.62□□□□□ -0.07
NLKQ9UBE8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NLKQ9UBE8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NLKQ9UBE8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NLKQ9UBE8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NLKQ9UBE8 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NLKQ9UBE8 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NLKQ9UBE8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NLKQ9UBE8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NLKQ9UBE8 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.62□□□□□ -0.07
NLKQ9UBE8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.62□□□□□ -0.07
NLKQ9UBE8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.62□□□□□ -0.07
NLKQ9UBE8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NLKQ9UBE8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 PPT1-215ENST00000641471 2368 ntBASIC14.61□□□□□ -0.07
NLKQ9UBE8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 AP005117.1-201ENST00000584346 1413 ntBASIC14.61□□□□□ -0.07
NLKQ9UBE8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 SPDYE21P-201ENST00000413323 827 ntBASIC14.61□□□□□ -0.07
NLKQ9UBE8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 SIGLEC30P-201ENST00000455569 941 ntBASIC14.61□□□□□ -0.07
NLKQ9UBE8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 AP001269.4-201ENST00000609611 512 ntBASIC14.61□□□□□ -0.07
NLKQ9UBE8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
NLKQ9UBE8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NLKQ9UBE8 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.6□□□□□ -0.07
NLKQ9UBE8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 EGFEM1P-202ENST00000431685 1563 ntBASIC14.6□□□□□ -0.07
NLKQ9UBE8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
NLKQ9UBE8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NLKQ9UBE8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.6□□□□□ -0.07
NLKQ9UBE8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.6□□□□□ -0.07
NLKQ9UBE8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.6□□□□□ -0.07
NLKQ9UBE8 RBM17P3-201ENST00000417687 1192 ntBASIC14.6□□□□□ -0.07
NLKQ9UBE8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
NLKQ9UBE8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.6□□□□□ -0.07
NLKQ9UBE8 AC106795.1-205ENST00000512851 1056 ntBASIC14.6□□□□□ -0.07
NLKQ9UBE8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.6□□□□□ -0.07
NLKQ9UBE8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.6□□□□□ -0.07
NLKQ9UBE8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
NLKQ9UBE8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.6□□□□□ -0.07
NLKQ9UBE8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.6□□□□□ -0.07
NLKQ9UBE8 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NLKQ9UBE8 AP005117.1-202ENST00000581724 1908 ntBASIC14.6□□□□□ -0.07
NLKQ9UBE8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NLKQ9UBE8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms