Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXXC1Q9P0U4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXXC1Q9P0U4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CXXC1Q9P0U4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXXC1Q9P0U4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.35■□□□□ 0.37
CXXC1Q9P0U4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXXC1Q9P0U4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXXC1Q9P0U4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CXXC1Q9P0U4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXXC1Q9P0U4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CXXC1Q9P0U4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXXC1Q9P0U4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CXXC1Q9P0U4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 AC074338.1-201ENST00000416825 156 ntBASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 AC006033.1-201ENST00000440505 426 ntBASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 MIR4321-201ENST00000592276 80 ntBASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 AL021578.1-201ENST00000613646 709 ntBASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CXXC1Q9P0U4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CXXC1Q9P0U4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CXXC1Q9P0U4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXXC1Q9P0U4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXXC1Q9P0U4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXXC1Q9P0U4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CXXC1Q9P0U4 AC006538.1-201ENST00000567905 1585 ntBASIC17.33■□□□□ 0.37
CXXC1Q9P0U4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.33■□□□□ 0.37
CXXC1Q9P0U4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CXXC1Q9P0U4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 AC134915.1-201ENST00000426461 574 ntBASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 CLUHP6-201ENST00000580789 941 ntBASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.33■□□□□ 0.36
CXXC1Q9P0U4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXXC1Q9P0U4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CXXC1Q9P0U4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CXXC1Q9P0U4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXXC1Q9P0U4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.32■□□□□ 0.36
CXXC1Q9P0U4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CXXC1Q9P0U4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CXXC1Q9P0U4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXXC1Q9P0U4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CXXC1Q9P0U4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXXC1Q9P0U4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CXXC1Q9P0U4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms