Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 AC023310.3-201ENST00000557027 670 ntBASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 AC100756.1-201ENST00000562736 682 ntBASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 AC138749.3-201ENST00000567691 622 ntBASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 AC116165.1-201ENST00000611806 668 ntBASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 MIR6069-201ENST00000620069 79 ntBASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
FBXO28Q9NVF7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 CU639417.3-201ENST00000624240 1404 ntBASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 AL365330.1-201ENST00000607459 531 ntBASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 SLC7A15P-201ENST00000424028 1363 ntBASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FBXO28Q9NVF7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 AC011676.5-201ENST00000624864 2660 ntBASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 ALOX12P2-203ENST00000570921 1945 ntBASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 AC093004.1-201ENST00000508850 424 ntBASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FBXO28Q9NVF7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FBXO28Q9NVF7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms