Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
POLR2J3Q9H1A7 REXO1L8P-201ENST00000604378 1897 ntBASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 MIR648-201ENST00000385046 94 ntBASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 MRPL20P1-201ENST00000400819 433 ntBASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 AC105339.3-201ENST00000560043 636 ntBASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 AC005593.1-201ENST00000624894 515 ntBASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
POLR2J3Q9H1A7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 AC012569.1-201ENST00000591191 1524 ntBASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 RPS2P1-201ENST00000434010 821 ntBASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 DUSP5P1-201ENST00000441325 1139 ntBASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 AL356488.2-201ENST00000602755 427 ntBASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 AC021097.1-201ENST00000607902 574 ntBASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
POLR2J3Q9H1A7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms