Protein–RNA interactions for Protein: Q9C002

NMES1, Normal mucosa of esophagus-specific gene 1 protein, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMES1Q9C002 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NMES1Q9C002 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NMES1Q9C002 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NMES1Q9C002 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.52□□□□□ -0.25
NMES1Q9C002 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NMES1Q9C002 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.52□□□□□ -0.25
NMES1Q9C002 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NMES1Q9C002 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NMES1Q9C002 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NMES1Q9C002 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NMES1Q9C002 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.52□□□□□ -0.25
NMES1Q9C002 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NMES1Q9C002 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NMES1Q9C002 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
NMES1Q9C002 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NMES1Q9C002 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NMES1Q9C002 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NMES1Q9C002 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NMES1Q9C002 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.51□□□□□ -0.25
NMES1Q9C002 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NMES1Q9C002 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NMES1Q9C002 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NMES1Q9C002 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NMES1Q9C002 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.51□□□□□ -0.25
NMES1Q9C002 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.51□□□□□ -0.25
NMES1Q9C002 AL592424.1-201ENST00000563624 1536 ntBASIC13.51□□□□□ -0.25
NMES1Q9C002 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.51□□□□□ -0.25
NMES1Q9C002 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NMES1Q9C002 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.51□□□□□ -0.25
NMES1Q9C002 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.51□□□□□ -0.25
NMES1Q9C002 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 SPDYE15P-201ENST00000424157 909 ntBASIC13.51□□□□□ -0.25
NMES1Q9C002 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.51□□□□□ -0.25
NMES1Q9C002 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.51□□□□□ -0.25
NMES1Q9C002 GUSBP12-201ENST00000513727 720 ntBASIC13.51□□□□□ -0.25
NMES1Q9C002 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.51□□□□□ -0.25
NMES1Q9C002 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.51□□□□□ -0.25
NMES1Q9C002 MIR4492-201ENST00000581627 80 ntBASIC13.51□□□□□ -0.25
NMES1Q9C002 AC140113.3-201ENST00000605663 199 ntBASIC13.51□□□□□ -0.25
NMES1Q9C002 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
NMES1Q9C002 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NMES1Q9C002 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.51□□□□□ -0.25
NMES1Q9C002 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.51□□□□□ -0.25
NMES1Q9C002 AL023973.1-201ENST00000624619 620 ntBASIC13.51□□□□□ -0.25
NMES1Q9C002 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
NMES1Q9C002 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NMES1Q9C002 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.51□□□□□ -0.25
NMES1Q9C002 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.51□□□□□ -0.25
NMES1Q9C002 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.51□□□□□ -0.25
NMES1Q9C002 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
NMES1Q9C002 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NMES1Q9C002 AC232323.1-201ENST00000540724 2099 ntBASIC13.51□□□□□ -0.25
NMES1Q9C002 REXO1L5P-201ENST00000622260 2098 ntBASIC13.51□□□□□ -0.25
NMES1Q9C002 AL390755.1-201ENST00000623716 2027 ntBASIC13.51□□□□□ -0.25
NMES1Q9C002 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NMES1Q9C002 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NMES1Q9C002 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NMES1Q9C002 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.5□□□□□ -0.25
NMES1Q9C002 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NMES1Q9C002 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.5□□□□□ -0.25
NMES1Q9C002 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.5□□□□□ -0.25
NMES1Q9C002 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NMES1Q9C002 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NMES1Q9C002 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NMES1Q9C002 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NMES1Q9C002 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NMES1Q9C002 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
NMES1Q9C002 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.5□□□□□ -0.25
NMES1Q9C002 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.5□□□□□ -0.25
NMES1Q9C002 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NMES1Q9C002 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.5□□□□□ -0.25
NMES1Q9C002 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
NMES1Q9C002 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NMES1Q9C002 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NMES1Q9C002 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NMES1Q9C002 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NMES1Q9C002 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.5□□□□□ -0.25
NMES1Q9C002 AC013726.1-201ENST00000563747 2285 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms