Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 AC132872.4-202ENST00000622924 2756 ntBASIC9.83□□□□□ -0.84
LIMD2Q9BT23 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 FRMD8P1-201ENST00000440433 1524 ntBASIC9.83□□□□□ -0.84
LIMD2Q9BT23 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 BX005266.1-201ENST00000473402 457 ntBASIC9.83□□□□□ -0.84
LIMD2Q9BT23 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 AC073648.2-201ENST00000510116 352 ntBASIC9.83□□□□□ -0.84
LIMD2Q9BT23 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 AL139424.1-201ENST00000607572 797 ntBASIC9.83□□□□□ -0.84
LIMD2Q9BT23 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 AL355877.3-201ENST00000622820 899 ntBASIC9.83□□□□□ -0.84
LIMD2Q9BT23 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 AL513523.2-202ENST00000427283 2040 ntBASIC9.83□□□□□ -0.84
LIMD2Q9BT23 FOS-208ENST00000555686 1496 ntTSL 2 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LIMD2Q9BT23 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC9.82□□□□□ -0.84
LIMD2Q9BT23 RPS2P28-201ENST00000314255 741 ntBASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms