Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CDCA3Q99618 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA3Q99618 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA3Q99618 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
CDCA3Q99618 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.82■□□□□ 0.28
CDCA3Q99618 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA3Q99618 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA3Q99618 TOMM22P5-201ENST00000416399 439 ntBASIC16.82■□□□□ 0.28
CDCA3Q99618 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
CDCA3Q99618 AC007551.1-201ENST00000457394 519 ntBASIC16.82■□□□□ 0.28
CDCA3Q99618 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.82■□□□□ 0.28
CDCA3Q99618 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.82■□□□□ 0.28
CDCA3Q99618 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.82■□□□□ 0.28
CDCA3Q99618 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.82■□□□□ 0.28
CDCA3Q99618 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.82■□□□□ 0.28
CDCA3Q99618 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA3Q99618 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA3Q99618 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDCA3Q99618 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA3Q99618 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA3Q99618 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.82■□□□□ 0.28
CDCA3Q99618 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDCA3Q99618 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA3Q99618 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDCA3Q99618 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.81■□□□□ 0.28
CDCA3Q99618 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.81■□□□□ 0.28
CDCA3Q99618 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 OR6D1P-202ENST00000641007 5290 ntBASIC16.81■□□□□ 0.28
CDCA3Q99618 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDCA3Q99618 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 AZGP1P1-201ENST00000411909 902 ntBASIC16.81■□□□□ 0.28
CDCA3Q99618 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.81■□□□□ 0.28
CDCA3Q99618 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.81■□□□□ 0.28
CDCA3Q99618 AC108725.1-201ENST00000495472 409 ntBASIC16.81■□□□□ 0.28
CDCA3Q99618 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CDCA3Q99618 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.81■□□□□ 0.28
CDCA3Q99618 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.81■□□□□ 0.28
CDCA3Q99618 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CDCA3Q99618 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.81■□□□□ 0.28
CDCA3Q99618 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.81■□□□□ 0.28
CDCA3Q99618 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDCA3Q99618 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.81■□□□□ 0.28
CDCA3Q99618 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.81■□□□□ 0.28
CDCA3Q99618 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.81■□□□□ 0.28
CDCA3Q99618 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.81■□□□□ 0.28
CDCA3Q99618 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.81■□□□□ 0.28
CDCA3Q99618 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.81■□□□□ 0.28
CDCA3Q99618 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.81■□□□□ 0.28
CDCA3Q99618 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDCA3Q99618 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDCA3Q99618 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDCA3Q99618 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.8■□□□□ 0.28
CDCA3Q99618 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDCA3Q99618 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CDCA3Q99618 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDCA3Q99618 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.8■□□□□ 0.28
CDCA3Q99618 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDCA3Q99618 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDCA3Q99618 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CDCA3Q99618 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.8■□□□□ 0.28
CDCA3Q99618 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDCA3Q99618 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDCA3Q99618 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDCA3Q99618 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDCA3Q99618 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.8■□□□□ 0.28
CDCA3Q99618 BAATP1-201ENST00000412284 1225 ntBASIC16.8■□□□□ 0.28
CDCA3Q99618 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.8■□□□□ 0.28
CDCA3Q99618 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.8■□□□□ 0.28
CDCA3Q99618 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.8■□□□□ 0.28
CDCA3Q99618 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.8■□□□□ 0.28
CDCA3Q99618 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.8■□□□□ 0.28
CDCA3Q99618 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.8■□□□□ 0.28
CDCA3Q99618 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.8■□□□□ 0.28
CDCA3Q99618 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CDCA3Q99618 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CDCA3Q99618 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.8■□□□□ 0.28
CDCA3Q99618 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDCA3Q99618 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDCA3Q99618 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDCA3Q99618 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDCA3Q99618 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDCA3Q99618 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms