Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
COL21A1Q96P44 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.53■□□□□ 0.08
COL21A1Q96P44 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 AL031731.1-201ENST00000642131 2094 ntBASIC15.53■□□□□ 0.08
COL21A1Q96P44 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 KRT8P39-201ENST00000396270 1433 ntBASIC15.53■□□□□ 0.08
COL21A1Q96P44 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
COL21A1Q96P44 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.53■□□□□ 0.08
COL21A1Q96P44 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.53■□□□□ 0.08
COL21A1Q96P44 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 AL513480.1-201ENST00000451731 511 ntBASIC15.53■□□□□ 0.08
COL21A1Q96P44 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
COL21A1Q96P44 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.53■□□□□ 0.08
COL21A1Q96P44 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.53■□□□□ 0.08
COL21A1Q96P44 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.53■□□□□ 0.08
COL21A1Q96P44 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
COL21A1Q96P44 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.53■□□□□ 0.08
COL21A1Q96P44 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.53■□□□□ 0.08
COL21A1Q96P44 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
COL21A1Q96P44 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
COL21A1Q96P44 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
COL21A1Q96P44 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
COL21A1Q96P44 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.52■□□□□ 0.08
COL21A1Q96P44 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COL21A1Q96P44 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL21A1Q96P44 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
COL21A1Q96P44 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL21A1Q96P44 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.52■□□□□ 0.08
COL21A1Q96P44 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
COL21A1Q96P44 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
COL21A1Q96P44 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COL21A1Q96P44 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL21A1Q96P44 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL21A1Q96P44 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
COL21A1Q96P44 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL21A1Q96P44 HCG4-201ENST00000418983 998 ntBASIC15.52■□□□□ 0.08
COL21A1Q96P44 RHOQP3-201ENST00000437982 621 ntBASIC15.52■□□□□ 0.08
COL21A1Q96P44 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COL21A1Q96P44 KRT18P2-201ENST00000447938 1258 ntBASIC15.52■□□□□ 0.08
COL21A1Q96P44 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
COL21A1Q96P44 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.52■□□□□ 0.08
COL21A1Q96P44 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.52■□□□□ 0.08
COL21A1Q96P44 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.52■□□□□ 0.08
COL21A1Q96P44 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.52■□□□□ 0.08
COL21A1Q96P44 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COL21A1Q96P44 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.52■□□□□ 0.08
COL21A1Q96P44 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL21A1Q96P44 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL21A1Q96P44 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
COL21A1Q96P44 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.52■□□□□ 0.08
COL21A1Q96P44 AP001350.2-201ENST00000625104 1094 ntBASIC15.52■□□□□ 0.08
COL21A1Q96P44 AC007064.4-201ENST00000637740 555 ntBASIC15.52■□□□□ 0.08
COL21A1Q96P44 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.52■□□□□ 0.08
COL21A1Q96P44 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
COL21A1Q96P44 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
COL21A1Q96P44 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL21A1Q96P44 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.52■□□□□ 0.07
COL21A1Q96P44 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
COL21A1Q96P44 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.52■□□□□ 0.07
COL21A1Q96P44 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.52■□□□□ 0.07
COL21A1Q96P44 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL21A1Q96P44 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
COL21A1Q96P44 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL21A1Q96P44 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL21A1Q96P44 AC104640.1-201ENST00000562617 2109 ntBASIC15.52■□□□□ 0.07
COL21A1Q96P44 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL21A1Q96P44 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL21A1Q96P44 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 GGT4P-201ENST00000623672 1708 ntBASIC15.51■□□□□ 0.07
COL21A1Q96P44 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms