Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 AL662844.4-201ENST00000606367 2838 ntBASIC16.03■□□□□ 0.16
ATL1Q8WXF7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.03■□□□□ 0.16
ATL1Q8WXF7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 AC006449.6-201ENST00000612330 2296 ntBASIC16.03■□□□□ 0.16
ATL1Q8WXF7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATL1Q8WXF7 WASH6P-202ENST00000359512 1437 ntBASIC16.02■□□□□ 0.16
ATL1Q8WXF7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 AC092364.2-201ENST00000596710 2692 ntBASIC16.02■□□□□ 0.16
ATL1Q8WXF7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 AC005622.1-201ENST00000636801 1703 ntBASIC16.02■□□□□ 0.16
ATL1Q8WXF7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 AC040169.1-201ENST00000565382 521 ntBASIC16.02■□□□□ 0.16
ATL1Q8WXF7 AL513190.1-201ENST00000621254 727 ntBASIC16.02■□□□□ 0.16
ATL1Q8WXF7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ATL1Q8WXF7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.02■□□□□ 0.15
ATL1Q8WXF7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATL1Q8WXF7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.02■□□□□ 0.15
ATL1Q8WXF7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATL1Q8WXF7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.02■□□□□ 0.15
ATL1Q8WXF7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
ATL1Q8WXF7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.02■□□□□ 0.15
ATL1Q8WXF7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
ATL1Q8WXF7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
ATL1Q8WXF7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATL1Q8WXF7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATL1Q8WXF7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.15
ATL1Q8WXF7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATL1Q8WXF7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATL1Q8WXF7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATL1Q8WXF7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATL1Q8WXF7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.01■□□□□ 0.15
ATL1Q8WXF7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATL1Q8WXF7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.01■□□□□ 0.15
ATL1Q8WXF7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
ATL1Q8WXF7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATL1Q8WXF7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ATL1Q8WXF7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms