Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 RCN1P2-201ENST00000398357 915 ntBASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 PMS2P1-201ENST00000431037 1228 ntBASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 KRT8P26-201ENST00000534154 1276 ntBASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 LINC01238-205ENST00000567549 1107 ntBASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 SLC22A20-204ENST00000530038 1673 ntBASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 AC079776.2-201ENST00000641154 1609 ntBASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CKAP2Q8WWK9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 AC073508.3-201ENST00000619697 1419 ntBASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 MIR1224-201ENST00000408193 85 ntBASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 AC010331.1-201ENST00000611423 582 ntBASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CKAP2Q8WWK9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CKAP2Q8WWK9 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms