Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC097376.2-205ENST00000610159 5334 ntBASIC12.29□□□□□ -0.44
NUP35Q8NFH5 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 AC026396.1-201ENST00000419388 421 ntBASIC12.29□□□□□ -0.44
NUP35Q8NFH5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 NUS1P1-201ENST00000446295 882 ntBASIC12.29□□□□□ -0.44
NUP35Q8NFH5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 Z99916.2-201ENST00000604037 246 ntBASIC12.29□□□□□ -0.44
NUP35Q8NFH5 AL390719.2-201ENST00000606993 987 ntBASIC12.29□□□□□ -0.44
NUP35Q8NFH5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 AC141257.4-201ENST00000634557 245 ntBASIC12.29□□□□□ -0.44
NUP35Q8NFH5 AC136944.6-201ENST00000634818 245 ntBASIC12.29□□□□□ -0.44
NUP35Q8NFH5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 CYP2D8P-201ENST00000433633 1490 ntBASIC12.28□□□□□ -0.44
NUP35Q8NFH5 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.28□□□□□ -0.44
NUP35Q8NFH5 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 HBZP1-201ENST00000354915 429 ntBASIC12.28□□□□□ -0.44
NUP35Q8NFH5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 AC142381.4-202ENST00000563973 229 ntBASIC12.28□□□□□ -0.44
NUP35Q8NFH5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 AD001527.2-201ENST00000622994 785 ntBASIC12.28□□□□□ -0.44
NUP35Q8NFH5 AC073592.5-201ENST00000624854 528 ntBASIC12.28□□□□□ -0.44
NUP35Q8NFH5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.28□□□□□ -0.44
NUP35Q8NFH5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
NUP35Q8NFH5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
NUP35Q8NFH5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NUP35Q8NFH5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NUP35Q8NFH5 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms