Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.1
SRFBP1Q8NEF9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.64■□□□□ 0.1
SRFBP1Q8NEF9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SRFBP1Q8NEF9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 PCDHB19P-201ENST00000570871 2371 ntBASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 PRYP6-201ENST00000514804 343 ntBASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 AC005829.1-201ENST00000570002 483 ntBASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.64■□□□□ 0.09
SRFBP1Q8NEF9 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 AC005052.1-201ENST00000625181 2492 ntBASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 AC006449.6-201ENST00000612330 2296 ntBASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 AC073439.1-201ENST00000624121 1774 ntBASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 HTR5BP-201ENST00000430851 1154 ntBASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 AL135744.1-201ENST00000565098 629 ntBASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 AL365330.1-201ENST00000607459 531 ntBASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 AC026120.1-201ENST00000611536 926 ntBASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 PCDH8P1-201ENST00000428983 2773 ntBASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 AL592424.1-201ENST00000563624 1536 ntBASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRFBP1Q8NEF9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms