Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC4A11Q8NBS3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC4A11Q8NBS3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC4A11Q8NBS3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 HLA-J-203ENST00000494367 1087 ntBASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC4A11Q8NBS3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 AC026691.1-201ENST00000602502 2017 ntBASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 TSEN15P1-201ENST00000423257 515 ntBASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 AC024267.1-201ENST00000582320 895 ntBASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 AP001059.3-201ENST00000619053 235 ntBASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 LINC00628-201ENST00000628516 1289 ntBASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC4A11Q8NBS3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.29■□□□□ 0.36
SLC4A11Q8NBS3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms