Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 BNIP3P29-201ENST00000598302 571 ntBASIC17.63■□□□□ 0.41
HERC6Q8IVU3 TMEM261P1-201ENST00000604899 340 ntBASIC17.63■□□□□ 0.41
HERC6Q8IVU3 AC011447.5-201ENST00000616168 564 ntBASIC17.63■□□□□ 0.41
HERC6Q8IVU3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 KRT8P39-201ENST00000396270 1433 ntBASIC17.63■□□□□ 0.41
HERC6Q8IVU3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.63■□□□□ 0.41
HERC6Q8IVU3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 AL133338.1-201ENST00000565695 1517 ntBASIC17.62■□□□□ 0.41
HERC6Q8IVU3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 AC080080.1-201ENST00000625121 2420 ntBASIC17.62■□□□□ 0.41
HERC6Q8IVU3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 AC104989.1-201ENST00000519711 778 ntBASIC17.62■□□□□ 0.41
HERC6Q8IVU3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 RRP7BP-205ENST00000566851 833 ntBASIC17.62■□□□□ 0.41
HERC6Q8IVU3 MIR4538-201ENST00000581377 78 ntBASIC17.62■□□□□ 0.41
HERC6Q8IVU3 AC061975.2-201ENST00000581722 295 ntBASIC17.62■□□□□ 0.41
HERC6Q8IVU3 AC015936.2-201ENST00000593177 259 ntBASIC17.62■□□□□ 0.41
HERC6Q8IVU3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 AL033527.5-201ENST00000641382 801 ntBASIC17.62■□□□□ 0.41
HERC6Q8IVU3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HERC6Q8IVU3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 ANKRD19P-201ENST00000338192 862 ntBASIC17.61■□□□□ 0.41
HERC6Q8IVU3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HERC6Q8IVU3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC6Q8IVU3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms