Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAPH1Q70E73 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.54■□□□□ 0.24
RAPH1Q70E73 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAPH1Q70E73 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
RAPH1Q70E73 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RAPH1Q70E73 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RAPH1Q70E73 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RAPH1Q70E73 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.53■□□□□ 0.24
RAPH1Q70E73 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.53■□□□□ 0.24
RAPH1Q70E73 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
RAPH1Q70E73 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 AKR1C7P-201ENST00000305623 895 ntBASIC16.53■□□□□ 0.24
RAPH1Q70E73 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.53■□□□□ 0.24
RAPH1Q70E73 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.53■□□□□ 0.24
RAPH1Q70E73 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.53■□□□□ 0.24
RAPH1Q70E73 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.53■□□□□ 0.24
RAPH1Q70E73 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RAPH1Q70E73 RPS15P9-201ENST00000494093 319 ntBASIC16.53■□□□□ 0.24
RAPH1Q70E73 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RAPH1Q70E73 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.53■□□□□ 0.24
RAPH1Q70E73 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.53■□□□□ 0.24
RAPH1Q70E73 LINC02228-204ENST00000642115 2962 ntBASIC16.53■□□□□ 0.24
RAPH1Q70E73 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RAPH1Q70E73 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RAPH1Q70E73 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 LINC01144-201ENST00000626198 1710 ntBASIC16.53■□□□□ 0.24
RAPH1Q70E73 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RAPH1Q70E73 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAPH1Q70E73 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAPH1Q70E73 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
RAPH1Q70E73 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAPH1Q70E73 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAPH1Q70E73 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAPH1Q70E73 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
RAPH1Q70E73 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAPH1Q70E73 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAPH1Q70E73 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.52■□□□□ 0.24
RAPH1Q70E73 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAPH1Q70E73 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAPH1Q70E73 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAPH1Q70E73 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
RAPH1Q70E73 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAPH1Q70E73 AF238378.1-201ENST00000526806 358 ntBASIC16.52■□□□□ 0.24
RAPH1Q70E73 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAPH1Q70E73 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.52■□□□□ 0.24
RAPH1Q70E73 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.52■□□□□ 0.24
RAPH1Q70E73 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.52■□□□□ 0.24
RAPH1Q70E73 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RAPH1Q70E73 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAPH1Q70E73 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAPH1Q70E73 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAPH1Q70E73 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RAPH1Q70E73 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RAPH1Q70E73 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAPH1Q70E73 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAPH1Q70E73 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAPH1Q70E73 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.52■□□□□ 0.23
RAPH1Q70E73 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.52■□□□□ 0.23
RAPH1Q70E73 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAPH1Q70E73 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAPH1Q70E73 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RAPH1Q70E73 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAPH1Q70E73 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.51■□□□□ 0.23
RAPH1Q70E73 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAPH1Q70E73 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAPH1Q70E73 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAPH1Q70E73 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAPH1Q70E73 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAPH1Q70E73 AC129492.6-201ENST00000611383 1305 ntBASIC16.51■□□□□ 0.23
RAPH1Q70E73 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.51■□□□□ 0.23
RAPH1Q70E73 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAPH1Q70E73 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAPH1Q70E73 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RAPH1Q70E73 REXO1L8P-201ENST00000604378 1897 ntBASIC16.51■□□□□ 0.23
RAPH1Q70E73 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAPH1Q70E73 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAPH1Q70E73 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAPH1Q70E73 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms